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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922171.1_cds_XP_016470973.1_63366
CDS Infomation

[gene=LOC107793193] [db_xref=GeneID:107793193] [protein=DNA polymerase beta-like isoform X3] [protein_id=XP_016470973.1] [location=join(18883..18987,19099..19236,20446..20775,20892..20985,21097..21227,21472..21534,21719..21898,21977..22030,22504..22592,23642..23732,24591..24671,25331..25398,25487..25560,25675..25679)] [gbkey=CDS]
Sequence

ATGGCGCCAAAGAAAGATAAATCTCCACTTTCCGATCCAGATGGAATGTTTTCGGGTATG
GTCGTATTCTTGATTGAAACCGGAGTTCAATCCCGGCGGTTACAGATATGGAAGCAAAAA
TTGGTTCAAATGGGGGCTAAAATAGAGGACCCTTTTTCCAAAAATGTTACTCATGTTTTT
GCAATGGATGCAAATTCGCTTCTTCAGAAAGTTGATCGAGAACGTCTTAGTCGCTTTAAA
GCTAAACTTCTCGCATATCAGTGGCTAGAGGACAGCTTAACAAAAGGAGAGAAAGCATCT
GAGGATCTGTATGTCTTGTCCCTGCAATCACGAGGAGGCTCCCTTAGTCCTAAAGCTGAT
AATGGAAGTCATCCTAATAGCAGTGAAATTACACCAAAGAAAAGTCGCAGTTCTACTGAA
GATGCCAAGAATGCAAGCCCAAGACACATGAATGACACTAAAGAACTTGTTGTAGATGAT
TCACAAGATACTAAAAGTGCCTCTTCACTCGCATCACGTTCTTCAAGCCCAGAAGTGACA
AGTTCTGAGGTCATTGATTCTCATAATAATCCTGTTGGAACATCAGACTCATCTTCACTT
TATAAGCCTCCGGATTTAAACCGAAATATCACTGAGATATTTGGGAAGCTCATCAACATA
TATAGAGCACTGGGTGATGACCGGAGATCATTCAGCTATTATAAAGCTATACCAGTTATT
GAGAAATTGCCATTCAAAATTGAGAGCGTGGACCAGGTTAAGCACCTACCTGCTATTGGA
AAGTCGATGCAAGACCATATTCAGGAGATAGTCACCACAGGGAAGCTGTCTAAATTGGAA
CATTTTGAGAAGGATGAAAAGGTAAAAACAATCAGCTTATTTGGAGAGGTTTGGGGTATT
GGTCCAGCCACTGCTCTAAAACTTTATGAGAAAGGACACCGAACTCTTGATGACCTTAAA
AATGAGGATTCATTGACTCATTCTCAAAGGTTAGGGTTGAAATATTTTGATGACATTCAA
ACCAGGATTCCACGGCATGAGGTTGAAGAGATGGAACGTCTACTACAGAAAGTTGGAGAG
GAAATTTTGCCCAGTGTGATTGTTGTGTGTGGAGGATCATACAGACGTGGAAAGTCTTCT
TGTGGTGATATGGACATTGTTATTACTCATGCTGATGGTAAAAGTCATATAGGCTTTCTT
CCTAAGTTTATAAAACGTCTAAAAGACATGAAGTTTTTGAGAGAAGATCTGGTCTTCAGT
GTTCATAGCACAGAGGGTACAGATTCAGGAGTTGACACATATTTTGGGCTCTGCACCTAT
CCTGGCCGAGAATTGCGACATCGCATTGACTTTAAGGTGTATCCAAGGGATATATATGCA
TTTGGACTGATAGCATGGACTGGGAATGACGTCTTGAATAGAAGGCTTAGATTATTAGCA
GAATCCAAGGGCTTCCATTTAGATGATACAGGGCTATTTCCAGCTACTCATAGTTCAGAC
TAA

Peptide Sequence

PEP ID

XP_016470973.1
PEP Infomation

PREDICTED: DNA polymerase beta-like isoform X3 [Nicotiana tabacum]
Sequence

MAPKKDKSPLSDPDGMFSGMVVFLIETGVQSRRLQIWKQKLVQMGAKIEDPFSKNVTHVF
AMDANSLLQKVDRERLSRFKAKLLAYQWLEDSLTKGEKASEDLYVLSLQSRGGSLSPKAD
NGSHPNSSEITPKKSRSSTEDAKNASPRHMNDTKELVVDDSQDTKSASSLASRSSSPEVT
SSEVIDSHNNPVGTSDSSSLYKPPDLNRNITEIFGKLINIYRALGDDRRSFSYYKAIPVI
EKLPFKIESVDQVKHLPAIGKSMQDHIQEIVTTGKLSKLEHFEKDEKVKTISLFGEVWGI
GPATALKLYEKGHRTLDDLKNEDSLTHSQRLGLKYFDDIQTRIPRHEVEEMERLLQKVGE
EILPSVIVVCGGSYRRGKSSCGDMDIVITHADGKSHIGFLPKFIKRLKDMKFLREDLVFS
VHSTEGTDSGVDTYFGLCTYPGRELRHRIDFKVYPRDIYAFGLIAWTGNDVLNRRLRLLA
ESKGFHLDDTGLFPATHSSD

Transcript Sequence

Gene sequence data has not been registered.